Shitong Luo

The paper introduces RDE, an unsupervised method that predicts mutation effects on protein-protein binding by estimating conformational flexibility from protein structures, outperforming existing methods.

From a single sequence, OmegaFold reaches mean LDDT 0.82 on 146 CAMEO targets, between MSA-based RoseTTAFold (0.75) and AlphaFold2 (0.86), and runs about ten times faster.

This paper introduces a diffusion-based generative model for designing and optimizing antigen-specific antibodies by jointly modeling CDR sequences and structures.