Xin Zou

The paper introduces SEED, a plant-specific deconvolution framework for bulk RNA-seq data, and applies it to identify terroir-associated cell subtypes in Cabernet Sauvignon grapes.

CrosPIT provides a cross-platform pipeline for integrated transcriptomics analysis, enabling scalable and reproducible workflows across languages and hardware.

scCODE optimizes differentially expressed gene detection in scRNA-seq data by incorporating gene filtering and evaluating performance without prior knowledge of true results.