Peter J. Maughan

This paper presents a high-quality chromosome-scale reference genome assembly for Aegilops peregrina using PacBio HiFi and Hi-C sequencing, enabling genomic analysis of its subgenomes.

The paper maps a zfBED NLR gene essential for Pc94 resistance in oat, develops a diagnostic marker, and identifies diverse introgression sizes in oat cultivars.

The paper examines how domestication affects the chromatin landscape in grain amaranth, finding that 2.5% of chromatin regions switch states during domestication, associated with selective sweeps.

The paper presents a pangenome and pantranscriptome of hexaploid oat, describing gene expression diversity and structural genome variation across 33 accessions and six tissues.

The paper assembles and annotates the genome of Chenopodium ficifolium to develop a diploid model system for studying allotetraploid quinoa genetics and improve agronomic traits.

This study analyzes leaf shape variation in Chenopodium hircinum across 23 populations to link morphological traits with environmental factors like temperature and altitude.

This study presents a high-quality genome assembly of Ae. umbellulata and resequencing data revealing structural variations, evolutionary sub-populations, and new resistance gene haplotypes useful for wheat improvement.

The paper reports chromosome-scale genome assemblies of eight quinoa accessions, identifying structural variations and providing resources for genetic studies.

The paper outlines genomic resources developed by the International Weed Genomics Consortium to improve weed control and crop breeding through insights into stress tolerance.