Author

Ashley R. Woodfin

Research Institute of Molecular PathologyORCID 0000-0003-4154-6002Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Assay:ChIP-seq· 1 Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1 Assay:metagenomics· 1 Research Focus:protein structure prediction· 1 Assay:proteomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Alex M. JaegeriD· 1 shared Alexander StarkiD· 1 shared Ariel S. Schwartz· 1 shared Christoph Neumayr· 1 shared Christopher A. PoleraiD· 1 shared Corey M. DambacheriD· 1 shared Cosmas D. ArnoldiD· 1 shared Felix MuerdteriD· 1 shared

Activity by Year

2017-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperGenomics

Alex M. JaegerORCID

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2 papers

Recent·Most cited

Discovery and Targeting of a Cryptic Human Proteome

Joel M. Chick, Ashley R. Woodfin, Jessica Weir, Marco Blanchette, Ariel S. Schwartz, Leopold Garnar-Wortzel, Christopher A. Polera, Sebastian C.J. Steiniger, Marcus R. Kelly, Kerry Wilson, Jon A. Bass, Alex M. Jaeger, Imad Ajjawi, Corey M. Dambacher

The paper introduces RyboCypher, a platform that maps the dark transcriptome to unannotated peptides, identifying cryptic proteins in cancer cell lines, tumors, and healthy tissues.

bioRxiv · Aug 11, 2026 · PreprintGenomics

Resolving systematic errors in widely-used enhancer activity assays in human cells enables genome-wide functional enhancer characterization

Felix Muerdter, Łukasz M. Boryń, Ashley R. Woodfin, Christoph Neumayr, Martina Rath, Muhammad Mamduh Ahmad Zabidi, Michaela Pagani, Vanja Haberle, Tomáš Kazmar, Rui R. Catarino, Katharina Schernhuber, Cosmas D. Arnold, Alexander Stark

The paper identifies and corrects systematic errors in enhancer activity assays, improving the reliability of genome-wide enhancer characterization in human cells.

bioRxiv · Jul 17, 2017 · PreprintGenomics