Author

Sofia A. Bengoa Luoni

Wageningen University & ResearchORCID 0000-0003-4254-8309Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Plant Biology· 1

Signature Assays, Organisms & Methods

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Organism:Arabidopsis· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Jeremy HarbinsoniD· 2 shared Mark G. M. AartsiD· 2 shared Dick de RidderiD· 1 shared Farid MelganiiD· 1 shared Felicia C WoltersiD· 1 shared Francesco GarassinoiD· 1 shared Francisca Reyes MarqueziD· 1 shared Frank F. M. BeckeriD· 1 shared

Activity by Year

2023-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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2 shared papersPlant Biology

Jeremy HarbinsonORCID

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3 papers

Recent·Most cited

Plant BiologyAnnals of BotanyPeer-reviewedOct 24, 2024

Expanding the Triangle of U: The genome assembly of Hirschfeldia incana provides insights into chromosomal evolution, phylogenomics and high photosynthesis-related traits

Nam V. Hoang, Nora Walden, Ludovico Caracciolo…·M. Eric Schranz

This paper presents an improved genome assembly of Hirschfeldia incana, revealing insights into chromosomal evolution, phylogenomics, and genes related to high photosynthesis traits.

6 citations

plant (other)whole-genome sequencing

𝕏 PostBluesky

BioinformaticsbioRxivPreprintJan 17, 2024

Sunpheno: a deep neural network for phenological classification of sunflower images

Sofia A. Bengoa Luoni, Riccardo Ricci, Melanie A. Corzo…·Paula del Carmen Fernández

Sunpheno uses a pre-trained ResNet50 model to classify sunflower phenological stages from field images, showing high accuracy and speed.

DOI 10.1101/2024.01.17.574407

imagingdeep learning

𝕏 PostBluesky

BioinformaticsbioRxivPreprintOct 18, 2023

Comparative transcriptomics of Hirschfeldia incana and relatives highlights differences in photosynthetic pathways

Francesco Garassino, Sofia A. Bengoa Luoni, Tommaso Cumerlato…·Sandra Smit

The paper compares transcriptomic responses to high light in Hirschfeldia incana and three Brassicaceae species to identify differences in photosynthetic pathways.

2 citations

Arabidopsishuman

𝕏 PostBluesky