Author

Alyse A. Larkin

University of California, IrvineORCID 0000-0003-4466-0791Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Microbiology· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:metagenomics· 2 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1 Assay:DNA methylation· 1 Approach:statistical model· 1

Frequent Co-Authors

Adam Camillo MartinyiD· 3 shared Lucas J. UstickiD· 2 shared Angie NguyeniD· 1 shared Brendan Rae CarteriD· 1 shared Caterina R. GineriD· 1 shared Catherine A. GarciaiD· 1 shared Denis L. VolkoviD· 1 shared Francisco LatorreiD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 26 mutual co-author links

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3 shared papersMicrobiology

Adam Camillo MartinyORCID

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3 papers

Recent·Most cited

MicrobiologybioRxivPreprintSep 15, 2026

Decadal signatures of seasonal and ENSO-driven selection in microbial populations in distant oceans

Sergio González-Motos, Lidia Montiel, Alyse A. Larkin…·Ramiro Logares

The paper analyzes long-term genomic variation in microbial populations from two distant ocean observatories to identify seasonal and ENSO-driven selection signatures.

DOI 10.64898/2026.09.14.751425

metagenomicsstatistical model

𝕏 PostBluesky

MicrobiologymSpherePeer-reviewedJul 11, 2025

Global Phylogeography and Microdiversity of the Marine Diazotrophic Cyanobacteria Trichodesmium and UCYN-A

Angie Nguyen, Lucas J. Ustick, Alyse A. Larkin, Adam Camillo Martiny

This study analyzes the global diversity and distribution of Trichodesmium and UCYN-A diazotrophic cyanobacteria using nifH gene sequencing, revealing distinct microdiversity and environmental drivers.

2 citations

DNA methylationexperimental assay

𝕏 PostBluesky

GenomicsScientific DataPeer-reviewedApr 16, 2021

High spatial resolution global ocean metagenomes from Bio-GO-SHIP repeat hydrography transects

Alyse A. Larkin, Catherine A. Garcia, Nathan S. Garcia…·Adam Camillo Martiny

The paper presents high-resolution global ocean metagenomes collected as part of the Bio-GO-SHIP program to study microbial community dynamics and their link to biogeochemical fluxes.

37 citations

metagenomicsexperimental assay

𝕏 PostBluesky