Bradley Scott Perrin

EpiTune is a B-cell epitope prediction model that fine-tunes a protein language model to predict linear and conformational epitopes from antigen sequences with high accuracy.

This paper develops an in silico sequence-based method for OspA typing of Borrelia burgdorferi sensu lato using next-generation sequencing data, identifying new OspA variants and introducing a novel nomenclature system.

This study analyzes SARS-CoV-2 Mpro sequences from 4.89 million genomes to assess mutation patterns and structural conservation before Paxlovid use, finding rare escape mutations and strong purifying selection.