Author

Anastasios Siokis

Helmholtz Centre for Infection ResearchORCID 0000-0003-4695-0354Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Systems Biology· 2

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:benchmarking· 1

Frequent Co-Authors

Amirmohammad KazemeiniiD· 1 shared Chelsea Gallagher· 1 shared Gurdeep SinghiD· 1 shared Jose Prieto· 1 shared Michael Meyer‐HermanniD· 1 shared Peyman PassbaniD· 1 shared Philippe Auguste RobertiD· 1 shared Sanjana Balaji Kuttae· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperSystems Biology

Amirmohammad KazemeiniORCID

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2 papers

Recent·Most cited

Systems BiologybioRxivPreprintOct 8, 2026

AXIS: Agentic Extraction and Integration of Simulation Scenarios for Quantitative Systems Pharmacology

Amirmohammad Kazemeini, Jose Prieto, Sanjana Balaji Kuttae…·Peyman Passban

AXIS converts published QSP models and their companion publications into executable simulation configurations by integrating entity grounding, scenario extraction, and parameter assignment.

DOI 10.64898/2026.05.06.723244

experimental assaybenchmarking

𝕏 PostBluesky

Systems BiologyInternational Journal of Molecular SciencesPeer-reviewedSep 4, 2020

Agent-Based Modeling of T Cell Receptor Cooperativity

Anastasios Siokis, Philippe Auguste Robert, Michael Meyer‐Hermann

This study uses an agent-based model to show that TCR affinity modulation during immunological synapse formation depends on ligand density and F-actin dynamics, with centripetal transport and feedback mechanisms playing key roles.

4 citations

experimental assay

𝕏 PostBluesky