Author

Annie Château

Centre National de la Recherche ScientifiqueORCID 0000-0003-4760-8171Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:software / tool· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Organism:Drosophila· 1 Approach:experimental assay· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Alban MancheroniD· 1 shared Anna-Sophie Fiston-LavieriD· 1 shared Clément AgretiD· 1 shared Gaëtan DrociD· 1 shared Gautier SarahiD· 1 shared Manuel RuíziD· 1 shared Yasmine MansouriD· 1 shared

Activity by Year

2021-2022 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 11 mutual co-author links

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1 shared paperBioinformatics

Alban MancheronORCID

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2 papers

Recent·Most cited

BioinformaticsThe Journal of Open Source SoftwarePeer-reviewedDec 28, 2022

RedOak: a reference-free and alignment-freestructure for indexing a collection of similargenomes

Clément Agret, Annie Château, Gaëtan Droc…·Alban Mancheron

RedOak indexes and compresses large collections of similar genomes without a reference or alignment, enabling efficient sequence queries.

2 citations

whole-genome sequencingexperimental assay

𝕏 PostBluesky

BioinformaticsBMC BioinformaticsPeer-reviewedAug 6, 2021

BREC: An R package/Shiny app for automatically identifying heterochromatin boundaries and estimating local recombination rates along chromosomes

Yasmine Mansour, Annie Château, Anna-Sophie Fiston-Lavier

BREC identifies heterochromatin boundaries and estimates local recombination rates using statistical methods, validated on Drosophila melanogaster data.

5 citations

Drosophilastatistical model

𝕏 PostBluesky