Author

Huiying He

Chinese Academy of SciencesORCID 0000-0003-4844-9870Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 2 Organism:plant (other)· 2 Assay:whole-genome sequencing· 2 Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Approach:statistical model· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Bang-Zhen PaniD· 1 shared Bilian Qian· 1 shared Changning LiuiD· 1 shared Chao Liu· 1 shared Chao Qin· 1 shared Chengwei LiangiD· 1 shared Chunling Zhang· 1 shared Chunyan XuiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperGenomics

Bang-Zhen PanORCID

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2 papers

Recent·Most cited

GenomicsIndustrial Crops and ProductsPeer-reviewedAug 24, 2026

Chromosome-scale genome of the woody oilseed crop sacha inchi elucidates the molecular basis of alpha-linolenic acid biosynthesis and triacylglycerol accumulation in seeds

Bang-Zhen Pan, Xuan Zhang, Xiaodi Hu…·Zeng‐Fu Xu

This study presents a chromosome-scale genome of sacha inchi, revealing mechanisms of ALA biosynthesis and TAG accumulation through transcriptome analysis and gene expression patterns.

DOI 10.1016/j.indcrop.2026.124222

plant (other)whole-genome sequencing

𝕏 PostBluesky

GenomicsbioRxivPreprintMay 29, 2026

OneGenome-Rice (OGR): A genomic foundation model for rice

Bilian Qian, Chengwei Liang, Chao Qin…·Ziqing Deng

OneGenome-Rice (OGR) is a genomic foundation model for rice pre-trained on 422 genomes, outperforming existing models in 11 tasks and enabling downstream applications like trait analysis and gene expression prediction.

1 citation

plant (other)whole-genome sequencing

𝕏 PostBluesky