Vahid Jalili

The paper introduces MSPC, a method to rescue weak ChIP-seq binding sites across replicated samples, improving detection of biologically relevant regions while reducing false positives.

The paper describes AnVIL, a cloud-based platform that enables genomic data analysis without data transfer, improving security, scalability, and collaboration.

The paper introduces Galaxy-ML, a web-based platform for reproducible and scalable supervised machine learning in biomedicine, extending the Galaxy computational workbench.

This study shows that publishing software in package management systems increases its cited scholarly papers by 280%.

This study evaluates genome sequencing as a single diagnostic approach for fetal structural anomalies, showing it detects nearly all variants from standard tests and provides higher diagnostic yield than individual tests.

The paper develops a secure method for accessing distributed biomedical datasets across cloud platforms using OpenID Connect and OAuth2 integrated with Galaxy.