Author

Jane Chalker

Great Ormond Street HospitalORCID 0009-0000-1512-6966Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Research Focus:variant calling· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Approach:statistical model· 1 Assay:whole-exome sequencing· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Alona SosinskyiD· 1 shared Andrew D.J. PearsoniD· 1 shared Andrew S. MooreiD· 1 shared Brian A. WalkeriD· 1 shared Caedyn L. StinsoniD· 1 shared Chris JonesiD· 1 shared David González de CastroiD· 1 shared Debbie HicksiD· 1 shared

Activity by Year

2017-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperBioinformatics

Alona SosinskyORCID

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2 papers

Recent·Most cited

BioinformaticsNature CommunicationsPeer-reviewedJan 18, 2024

Clinical application of tumour-in-normal contamination assessment from whole genome sequencing

Jonathan Mitchell, Salvatore Milite, Jack Luke Bartram…·Giulio Caravagna

The paper develops a tool to assess tumour contamination in normal samples using whole-genome sequencing data, finding contamination in various cancer types and highlighting risks to variant calling.

12 citations

humanwhole-genome sequencing

𝕏 PostBluesky

GenomicsOncotargetPeer-reviewedDec 6, 2017

Development of a targeted sequencing approach to identify prognostic, predictive and diagnostic markers in paediatric solid tumours

Elisa Izquierdo, Lina Yuan, Sally L. George…·David González de Castro

The paper develops a targeted sequencing panel for paediatric solid tumours and validates its sensitivity and specificity across various sample types.

21 citations

humanwhole-exome sequencing

𝕏 PostBluesky