Author

Simon Klaes

Helmholtz Centre for Environmental ResearchORCID 0009-0000-8653-0675Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 2 Assay:proteomics· 2 Organism:E. coli· 1 Research Focus:host-pathogen & immune response· 1 Organism:human· 1 Assay:metagenomics· 1 Organism:mouse· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

Lorenz AdrianiD· 2 shared Beate Isabella EscheriD· 1 shared Chang DingiD· 1 shared Christian WhiteiD· 1 shared Darja DeobaldiD· 1 shared Kerstin GerundtiD· 1 shared Lisa Alvarez‐CoheniD· 1 shared Luise HennebergeriD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 21 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersMicrobiology

Lorenz AdrianORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

MicrobiologybioRxivPreprintJun 3, 2025

Sequential exposure to anoxic/oxic conditions leads to biotransformation and detoxification of sitagliptin in urban hyporheic zones

Simon Klaes, Kerstin Gerundt, Darja Deobald…·Myriel Cooper

This study investigates sitagliptin biotransformation in hyporheic zones under anoxic and oxic conditions, identifying detoxification pathways and transformation products.

DOI 10.1101/2025.06.03.657625

metagenomicsproteomics

𝕏 PostBluesky

BioinformaticsbioRxivPreprintNov 25, 2024

De novo peptide databases enable protein-based stable isotope probing of microbial communities with up to species-level resolution

Simon Klaes, Christian White, Lisa Alvarez‐Cohen…·Chang Ding

This paper introduces de novo peptide databases for Protein-SIP to analyze microbial communities with species-level resolution, showing comparable performance to genome-derived databases.

DOI 10.1101/2024.11.25.625156

E. colihuman

𝕏 PostBluesky