Author

Annie Nguyen

Michigan State UniversityORCID 0009-0001-0385-7320Unclaimed ORCID profile · follow to get notified of new preprints

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Annie Nguyen1 paper · Stanford University

Biology Disciplines

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Plant Biology· 1

Signature Assays, Organisms & Methods

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Organism:Arabidopsis· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1

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Anna PardoiD· 1 shared Brian St. AubiniD· 1 shared Catherine MercadoiD· 1 shared Jenny M. SchusteriD· 1 shared Jeremy PardoiD· 1 shared McKena Lipham WilsoniD· 1 shared Robert VanBureniD· 1 shared Rose A. MarksiD· 1 shared

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2025-2025 · peak 1/yr

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9 top collaborators · 36 mutual co-author links

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1 shared paperPlant Biology

Anna PardoORCID

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1 paper

Recent·Most cited

Plant BiologyPLANT PHYSIOLOGYPeer-reviewedDec 13, 2025

Variability in drought gene expression datasets highlight the need for community standardization

Robert VanBuren, Annie Nguyen, Rose A. Marks…·Seung Y. Rhee

This study analyzes drought gene expression datasets and finds they are inconsistent, proposing classifiers to detect drought stress and advocating for standardized protocols.

9 citations

Arabidopsisbulk RNA-seq

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