Author

Ya-Ling He

Chinese Academy of SciencesORCID 0009-0001-2102-7777Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Organism:human· 2 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:host-pathogen & immune response· 1 Approach:statistical model· 1

Frequent Co-Authors

Jinman FangiD· 2 shared Lu ZhangiD· 2 shared Xiao Zuo· 2 shared Yanfei Zhou· 2 shared Yuanwei ZhangiD· 2 shared Zhilei LiiD· 2 shared Bing ZhangiD· 1 shared Chenyi Ye· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 42 mutual co-author links

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2 shared papersCancer Biology

Jinman FangORCID

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2 papers

Recent·Most cited

Cancer BiologybioRxivPreprintOct 22, 2025

Pan-cancer analysis reveals that tumor microbiomes generate specific epitopes through transcriptional reprogramming

Jinman Fang, Yuxin Zhang, Wei Wang…·Yuanwei Zhang

This paper identifies microbial transcriptional reprogramming in tumors that generates tumor-specific epitopes, enhancing immunotherapy safety by enabling targeted T cell responses.

DOI 10.1101/2025.10.22.683275

humanbulk RNA-seq

BioinformaticsbioRxivPreprintJun 13, 2025

MimicNeoAI: An integrated pipeline for identifying microbial epitopes and mimicry of tumor neoepitopes

Tao Chen, Wei Wang, Xiao Zuo…·Yuanwei Zhang

MimicNeoAI identifies microbial epitopes and their tumor neoepitope mimics from sequencing data, revealing highly immunogenic microbial epitopes specific to tumors.

1 citation

humanbulk RNA-seq