Author
Qingxi Meng
Stanford UniversityORCID 0009-0001-4037-4731Unclaimed ORCID profile · follow to get notified of new preprints
Biology Disciplines
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2020-2023 · peak 3/yrCo-Author Collaboration Network
10 top collaborators · 29 mutual co-author links4 papers
Recent·Most cited
- GenomicsGenome MedicinePeer-reviewed
Single molecule methylation profiles of cell-free DNA in cancer with nanopore sequencing
Billy T. Lau, Alison Figueroa Almeda, Marie C. Schauer…·Hanlee P. Ji
The paper develops a nanopore sequencing strategy to measure cfDNA methylomes in cancer patients, enabling longitudinal monitoring during treatment.
84 citationstop 1% - BioinformaticsScientific ReportsPeer-reviewed
NanoSpring: reference-free lossless compression of nanopore sequencing reads using an approximate assembly approach
Qingxi Meng, Shubham Chandak, Yifan Zhu, Tsachy Weissman
NanoSpring compresses nanopore sequencing reads with a reference-free approximate assembly approach, achieving lower bit per base rates than gzip and competitive performance with CoLoRd.
12 citations - BioinformaticsBioinformaticsPeer-reviewed
\"GPress: a framework for querying General Feature Format (GFF) files and feature expression files in a compressed form\"
Qingxi Meng, Idoia Ochoa, Mikel Hernáez
GPress compresses and queries GFF and feature expression files efficiently, achieving significant size reduction without compromising retrieval speed.