Author

B. Dupin

Universidade Tecnológica Federal do ParanáORCID 0009-0002-1296-7991Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 1 Approach:experimental assay· 1 Organism:fungi (other)· 1 Organism:multiple species· 1 Approach:statistical model· 1

Frequent Co-Authors

David Roy SmithiD· 2 shared Matheus Sanitá LimaiD· 2 shared Alexandre Rossi PaschoaliD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

3 top collaborators · 3 mutual co-author links

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2 shared papersEvolutionary Biology

David Roy SmithORCID

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2 papers

Recent·Most cited

Evolutionary BiologybioRxivPreprintOct 10, 2026

Organelle intergenic DNA is preferentially distributed between opposite-polarity gene pairs.

Matheus Sanitá Lima, B. Dupin, David Roy Smith

The paper analyzes intergenic regions in mitochondrial and plastid genomes to show that opposite-polarity gene pairs have longer intergenic DNA than same-polarity pairs.

DOI 10.64898/2026.10.08.757646

multiple speciesstatistical model

𝕏 PostBluesky

BioinformaticsbioRxivPreprintJun 15, 2025

Protocol for GDT, Gene Dictionary Tool, to create and implement a gene dictionary across annotated genomes

B. Dupin, Matheus Sanitá Lima, Alexandre Rossi Paschoal, David Roy Smith

The paper introduces a protocol for creating and implementing gene dictionaries across annotated genomes using a Python CLI and Jupyter Notebooks, producing FAIR-compliant .gdict files.

DOI 10.1101/2025.06.15.659783

fungi (other)experimental assay

𝕏 PostBluesky