Author

Ranran Yu

Nanjing Drum Tower HospitalORCID 0009-0002-2181-3003Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 2 Organism:Arabidopsis· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Assay:DNA methylation· 1 Approach:machine learning (classical)· 1 Organism:plant (other)· 1

Frequent Co-Authors

Dijun CheniD· 2 shared Xinkai ZhouiD· 2 shared Chao HeiD· 1 shared Chunjiao XiaiD· 1 shared Junjiao YangiD· 1 shared Lin WangiD· 1 shared Luchang MingiD· 1 shared Shanni CaoiD· 1 shared

Activity by Year

2024-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersGenomics

Dijun ChenORCID

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2 papers

Recent·Most cited

Comprehensive mapping and modelling of the rice regulome landscape unveils the regulatory architecture underlying complex traits

Tao Zhu, Chunjiao Xia, Ranran Yu, Xinkai Zhou, Xingbing Xu, Lin Wang, Zhanxiang Zong, Junjiao Yang, Yinmeng Liu, Luchang Ming, Yuxin You, Dijun Chen, Weibo Xie

The paper maps rice chromatin accessibility across 23 tissues, identifies regulatory elements, and uses deep learning to model regulatory dynamics, revealing new functions and insights into complex trait regulation.

Nature Communications · Aug 2, 2024Peer-reviewedGenomics

Comprehensive integration of single-cell transcriptomic data illuminates the regulatory network architecture of plant cell fate specification

Shanni Cao, Xue Fei Zhao, Zhuojin Li, Ranran Yu, Yuqi Li, Xinkai Zhou, Wenhao Yan, Dijun Chen, Chao He

This study integrates single-cell transcriptomic data from Arabidopsis to identify cell types, developmental trajectories, and gene regulatory networks involved in root-shoot differentiation.

Acta Botanica Yunnanica · Apr 3, 2024Peer-reviewedBioinformatics