Author

Shanni Cao

Lingnan Normal UniversityORCID 0000-0001-6402-2581Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Organism:Arabidopsis· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Approach:deep learning· 1

Frequent Co-Authors

Chao HeiD· 1 shared Cheng SiiD· 1 shared Dijun CheniD· 1 shared Qiwen ZhongiD· 1 shared Ranran YuiD· 1 shared Ruolin YangiD· 1 shared Shipeng YangiD· 1 shared Wenhao YaniD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperBioinformatics

Chao HeORCID

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2 papers

Recent·Most cited

Plant BiologybioRxivPreprintDec 27, 2025

Single-cell transcriptomic atlas reveals that vascular tissues orchestrate cell fate transitions to initiate adventitious root formation in tomato

Shipeng Yang, Cheng Si, Xiaoting Jiang…·Ruolin Yang

This study constructs a single-cell transcriptomic atlas of tomato adventitious root development, identifying vascular tissues as key regulators of cell fate transitions and revealing conserved molecular mechanisms across species.

1 citation

plant (other)scRNA-seq

𝕏 PostBluesky

BioinformaticsActa Botanica YunnanicaPeer-reviewedApr 3, 2024

Comprehensive integration of single-cell transcriptomic data illuminates the regulatory network architecture of plant cell fate specification

Shanni Cao, Xue Fei Zhao, Zhuojin Li…·Chao He

This study integrates single-cell transcriptomic data from Arabidopsis to identify cell types, developmental trajectories, and gene regulatory networks involved in root-shoot differentiation.

7 citations

ArabidopsisscRNA-seq

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