Author

Shilong Zhang

China Pharmaceutical UniversityORCID 0009-0002-3055-9588Unclaimed ORCID profile · follow to get notified of new preprints

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Shilong Zhang1 paper · Zhejiang University

Biology Disciplines

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Bioinformatics· 1 Biophysics· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Chengjie Chu· 1 shared Cong FengiD· 1 shared Enyan Liu· 1 shared Haoyu ChaoiD· 1 shared Jean‐Louis MergnyiD· 1 shared Jiqing Shen· 1 shared Jun ZhouiD· 1 shared Liya LiuiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperBiophysics

Chengjie Chu

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2 papers

Recent·Most cited

Telomeric G-Quadruplexes Formed by Six G-overhang Permutation Repeats

Ziyue Guan, Tengshuo Luo, Jiqing Shen, Shilong Zhang, Chengjie Chu, Jun Zhou, Jean‐Louis Mergny, Mingpan Cheng

The paper investigates G-quadruplex formation from six G-overhang permutations in telomeres, revealing differences in stability and folding that affect DNA polymerase activity.

bioRxiv · Jul 17, 2026 · PreprintBiophysics

Improved Prediction of Bacterial Type VI Secretion Effector Proteins Using an Integrated Convolutional Neural Network Model Combining N-terminal Signal Sequences, Evolutionary Information and Pre-Trained Protein Language Features

Yueming Hu, Minqing Yan, Yanyan Zhu, Haoyu Chao, Sida Li, Qinyang Ni, Yanshi Hu, Enyan Liu, Liya Liu, Yifan Chen, Zeya Zhou, Yuhao Chen, Shilong Zhang, Yejun Wang, Cong Feng, Ming Chen

This paper introduces T6CNN, a model that improves T6SE prediction by integrating signal sequences, evolutionary data, and pre-trained features, achieving higher accuracy, sensitivity, and specificity than existing tools.

bioRxiv · Mar 7, 2025 · PreprintBioinformatics