Author

Allison W Li

University of WashingtonORCID 0009-0003-4751-0016Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:human· 2 Organism:bacteria (other)· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1

Frequent Co-Authors

Anderson Fernandes BritoiD· 1 shared Chris Arian· 1 shared Cornelius RoemeriD· 1 shared Denise KühnertiD· 1 shared Emma B. HodcroftiD· 1 shared I. A. JoiaiD· 1 shared Ivan AksamentoviD· 1 shared James HadfieldiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperBioinformatics

Anderson Fernandes BritoORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintNov 4, 2026

Disentangling Context-Specific Alzheimer's Disease Progression Signatures through an Explainable AI Framework

Allison W. Li, Wei Qiu, Chris Arian…·Su-In Lee

ADVISE identifies context-specific Alzheimer's disease progression signatures using an explainable AI framework and validates ROBO2 as a candidate regulator in excitatory neurons.

DOI 10.64898/2026.11.02.763789

humanscRNA-seq

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BioinformaticsbioRxivPreprintJul 17, 2026

✦ In-depth digest

Nextstrain automates real-time phylogenetic analysis of open data for endemic and emerging pathogens

Kimberly R. Andrews, Jennifer Chang, Cornelius Roemer…·Trevor Bedford

Standardized Snakemake pipelines on GitHub Actions fetch open sequence data, curate it, and publish daily or weekly updated phylogenies for 21 viruses and Mycobacterium tuberculosis.

1 citation

virusbacteria (other)

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