Author

Andria V. Rodrigues

Lawrence Berkeley National LaboratoryORCID 0009-0004-2277-8013Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioengineering· 1 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Assay:protein structure· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

Jose Henrique PereiraiD· 2 shared Paul D. AdamsiD· 2 shared Alberdina Aike van DijkiD· 1 shared Ana Cristina EbrechtiD· 1 shared Andy M. DeGiovanni· 1 shared Behzad RadiD· 1 shared Caleb R. GlassmaniD· 1 shared Calvin K. YipiD· 1 shared

Activity by Year

2021-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersBioengineering

Jose Henrique PereiraORCID

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2 papers

Recent·Most cited

A polyketide-based biosynthetic platform for diols, amino alcohols and hydroxyacids

Qingyun Dan, Yan Chiu, Namil Lee, Jose Henrique Pereira, Behzad Rad, Xixi Zhao, Kai Deng, Yiou Rong, Chunjun Zhan, Yan Chen, Seokjung Cheong, Chenyi Li, Jennifer W. Gin, Andria V. Rodrigues, Trent R. Northen, , Jay D. Keasling

This paper introduces a modular polyketide synthase platform for producing diols, amino alcohols, and hydroxyacids using engineered Streptomyces albus strains.

Nature Catalysis · Feb 11, 2025Peer-reviewedBioengineering

Accurate prediction of protein structures and interactions using a 3-track network

Minkyung Baek, Frank DiMaio, Ivan V. Anishchenko, Justas Dauparas, Sergey Ovchinnikov, Gyu Rie Lee, Jue Wang, Qian Cong, Lisa N. Kinch, Richard Dustin Schaeffer, Claudia Millán, Hahnbeom Park, Carson Adams, Caleb R. Glassman, Andy M. DeGiovanni, , David A. Baker

The paper introduces a 3-track network for accurate protein structure and interaction prediction, achieving performance close to DeepMind's CASP14 results and enabling rapid modeling of protein complexes from sequence data.

Science · Jul 15, 2021Peer-reviewedBioinformatics