Author

Chitose Takahashi

RIKENORCID 0009-0004-4660-9839Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Michihira TagamiiD· 2 shared Ri-ichiroh Manabe· 2 shared Yasushi OkazakiiD· 2 shared Akira HasegawaiD· 1 shared Annelies VerboniD· 1 shared Ayumi Taguchi· 1 shared Daisuke YoshimotoiD· 1 shared Haruko TakeyamaiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersCancer Biology

Michihira TagamiORCID

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2 papers

Recent·Most cited

Cancer BiologybioRxivPreprintMay 6, 2026

Integrating spatial and single-cell multi-omics analysis of induced pluripotent stem cell-derived cervical adenocarcinoma model

Saki Kamata, Ayumi Taguchi, Hitoshi Iuchi…·Kei Kawana

The paper establishes an HPV18-associated cervical adenocarcinoma model using iRCs and integrates spatial transcriptomics with single-cell multi-omics to identify Gland_A as a key component with specific molecular features.

DOI 10.64898/2026.05.01.722143

humanspatial transcriptomics

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GenomicsbioRxivPreprintJan 20, 2025

Genome-wide mapping of the Galleria mellonella larvae transcription start sites during fungal infection and treatment

Imad Abugessaisa, Mickey Konings, Ri-ichiroh Manabe…·Takeya Kasukawa

This study maps transcription start sites and active enhancers in Galleria mellonella larvae during fungal infection and treatment using LQ-ssCAGE.

DOI 10.1101/2025.01.20.627872

bulk RNA-seqstatistical model

𝕏 PostBluesky