Robert Warneke

KlinkPPI: Single Point of Access to Protein-Protein Interactions Across Databases

KlinkPPI provides a unified interface to retrieve and compare protein-protein interaction data from multiple databases without merging or consensus.

The evolution of a Na+-sensitive Vibrio cholerae mutant unmasks the moonlighting aminopeptidase PepA as a regulator of nhaB Na+/H+ antiporter gene expression

This study identifies PepA as a regulator of nhaB gene expression in Vibrio cholerae, revealing its role in Na+ homeostasis through suppressor mutations in a nhaA nqr mutant.

RapCluster: Bridging the Reproducibility Gap in Clustering Analysis

RapCluster provides an interactive web platform with 11 clustering algorithms to improve transparency and reproducibility in clustering analysis.

Photo-leucine incorporation in Bacillus subtilis: Identification of transporters and of a selectivity determinant in the Leu-tRNA synthetase

This study identifies transporters and a selectivity determinant in Leu-tRNA synthetase in Bacillus subtilis, revealing how photo-leucine is managed and its incorporation is limited to maintain cellular tolerance.

Modelling protein complexes with crosslinking mass spectrometry and deep learning

The paper improves deep learning-based structure modelling of protein complexes by integrating crosslinking mass spectrometry data, enhancing performance on challenging targets.

Coenzyme A biosynthesis in Bacillus subtilis: Discovery of a novel precursor metabolite for salvage and its uptake system

This study identifies a novel salvage pathway for coenzyme A in Bacillus subtilis, involving the uptake of cysteinopantetheine via a cystine transporter.