Author

Michelle A. DeMers

Massachusetts Institute of TechnologyORCID 0009-0005-2896-9037Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Approach:experimental assay· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Rogier BraakmaniD· 2 shared A. Murat EreniD· 1 shared Aldo A. ArellanoiD· 1 shared Allison CoeiD· 1 shared Christa B. SmithiD· 1 shared Christina BliemiD· 1 shared Claudia SteglichiD· 1 shared Elaina ThomasiD· 1 shared

Activity by Year

2024-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersBioinformatics

Rogier BraakmanORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintJan 16, 2024

Digital Microbe: A Genome-Informed Data Integration Framework for Collaborative Research on Emerging Model Organisms

Iva Veseli, Michelle A. DeMers, Zachary S. Cooper…·Rogier Braakman

The paper introduces Digital Microbes, an integrative framework for collaborative research on microbes, demonstrating its application with two case studies involving genomic and transcriptomic data.

DOI 10.1101/2024.01.16.575828

bacteria (other)whole-genome sequencing

𝕏 PostBluesky

MicrobiologyISME CommunicationsPeer-reviewedJan 1, 2024

Emergence of metabolic coupling to the heterotroph Alteromonas promotes dark survival in Prochlorococcus

Allison Coe, Rogier Braakman, Steven J. Biller…·Sallie W. Chisholm

The paper shows that Prochlorococcus develops a dark-tolerant phenotype when co-cultured with Alteromonas, involving metabolic coupling and shifts in gene expression.

6 citations

humanmouse

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