Author

Kirsty McCaffrey

National Institutes of HealthORCID 0009-0005-4760-6653Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Research Focus:genome assembly· 1 Organism:human· 1 Assay:long-read sequencing· 1 Organism:multiple species· 1

Frequent Co-Authors

Alice Maria GianiiD· 2 shared Bonhwang KooiD· 2 shared Erich David JarvisiD· 2 shared Erick DuarteiD· 2 shared Giulio FormentiiD· 2 shared Jack A MedicoiD· 2 shared Jennifer BalaccoiD· 2 shared Marco SollittoiD· 2 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Alice Maria GianiORCID

Mutual co-authors in cluster

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2 papers

Recent·Most cited

GenomicsCellPeer-reviewedAug 1, 2026

The complete genome of a songbird

Giulio Formenti, Nivesh Jain, Jack A Medico…·Erich David Jarvis

This paper presents the first fully phased, diploid, telomere-to-telomere genome of the zebra finch, revealing new genes and structural features.

9 citationstop 1%

zebrafishwhole-genome sequencing

𝕏 PostBluesky

BioinformaticsBioinformaticsPeer-reviewedJul 19, 2025

Evaluation of sequencing reads at scale using rdeval

Giulio Formenti, Bonhwang Koo, Marco Sollitto…·Erich David Jarvis

The paper introduces rdeval, a tool for efficiently evaluating and visualizing sequencing read metrics, showing improvements in read quality and genome assembly with PacBio data.

4 citations

humanmultiple species

𝕏 PostBluesky