Bonhwang Koo

The paper generates high-quality genome assemblies for two manta and devil ray species and identifies structural variations linked to pelagic adaptation.

The paper introduces GBZ-base and GAF-base, indexed pangenome file formats for efficient subgraph and alignment extraction.

This paper presents the first fully phased, diploid, telomere-to-telomere genome of the zebra finch, revealing new genes and structural features.

460 haplotypes from 230 genomes, selected to maximize common-variant coverage, capture 99.43% of All of Us common small variants and halve structurally unreliable regions and base errors versus HPRC1.

The Vertebrate Genomes Project Phase I provides high-quality reference genomes for 816 species, enabling evolutionary and conservation insights across vertebrates.

The paper introduces rdeval, a tool for efficiently evaluating and visualizing sequencing read metrics, showing improvements in read quality and genome assembly with PacBio data.

The paper examines associations between processing speed and psychopathology in a large pediatric sample, finding significant links with ADHD and learning disabilities.

This paper explores using passive audio capture to quantify vocalization features in children with selective mutism, presenting pilot study feasibility results and design limitations.

The paper assesses the impact of shared data on scientific literature using a brain imaging case study, showing increased publication rates and broader scientific collaboration.

The paper introduces ATLAS, a dataset of 304 T1-weighted MRIs with manual lesion segmentations to improve lesion segmentation algorithm accuracy.

The paper introduces the Healthy Brain Network (HBN) biobank, a large-scale multimodal dataset for pediatric mental health and learning disorders research, with initial data release.

The paper introduces PRIME-DE, an open resource for non-human primate MRI data, aggregating 13 datasets from 11 sites across 98 macaques.

The paper evaluates actimeters for inclusion in the Healthy Brain Network, finding the ActiGraph wGT3X-BT most suitable despite no clear overall superiority among devices.