Dylan Riffle

CARIBOU is a multi-agent AI system that autonomously performs bioinformatics analyses using HPC environments, adapting and refining workflows across datasets.

This paper introduces Biodesign Buddy, a generative AI system for biodesign education, and reports its deployment in an eight-week study with 64 students, showing support for AI integration in biodesign pedagogy.

This study uses single-cell transcriptomes to analyze cell-cell communication changes in Alzheimer's brains, identifying dysregulated signaling pathways and gene connections linked to disease.