Author

César Arenas‐Mena

The Graduate Center, CUNYORCID 0009-0005-6617-2563Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:ATAC-seq· 2 Research Focus:gene regulatory network inference· 2 Assay:ChIP-seq· 1 Research Focus:differential expression· 1 Assay:long-read sequencing· 1 Approach:machine learning (classical)· 1 Assay:proteomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Charles G. DankoiD· 1 shared Edward J. Rice· 1 shared Justin Gurges· 1 shared Serhat Akin· 1 shared Sevinç ErcaniD· 1 shared Sofija Miljovska· 1 shared Tanvi ShashikantiD· 1 shared Zihe WangiD· 1 shared

Activity by Year

2021-2023 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 21 mutual co-author links

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1 shared paperGenomics

Charles G. DankoORCID

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2 papers

Recent·Most cited

Developmental BiologybioRxivPreprintMay 14, 2023

Accessibility and activity of transcriptional regulatory elements during sea urchin embryogenesis and differentiation

César Arenas‐Mena, Serhat Akin

The paper identifies early TRE accessibility and transcriptional activity in sea urchin embryos, revealing mechanisms of regulatory potency during development.

DOI 10.1101/2023.05.14.540718

ATAC-seqproteomics

𝕏 PostBluesky

GenomicsBMC GenomicsPeer-reviewedOct 19, 2021

Identification and prediction of developmental enhancers in sea urchin embryos

César Arenas‐Mena, Sofija Miljovska, Edward J. Rice…·Charles G. Danko

The paper predicts enhancer activity in sea urchin embryos using chromatin accessibility, transcription, and Pol II data, finding Pol II distribution is the best predictor for promoter-overlapping elements.

10 citations

ATAC-seqChIP-seq

𝕏 PostBluesky