Author

Yu-Hsiang Tseng

University of California San DiegoORCID 0009-0005-8758-9739Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 2

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:database / resource· 1 Approach:experimental assay· 1 Research Focus:phylogenetics / evolution· 1 Approach:statistical model· 1

Frequent Co-Authors

Sumit WaliaiD· 2 shared Yatish TurakhiaiD· 2 shared Harsh MotwaniiD· 1 shared Kyle SmithiD· 1 shared Russell B Corbett-DetigiD· 1 shared Zexing Chen· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

6 top collaborators · 12 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Sumit WaliaORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

BioinformaticsNature Computational SciencePeer-reviewedJul 8, 2026

Ultrafast and Ultralarge Distance-Based Phylogenetics Using DIPPER

Sumit Walia, Zexing Chen, Yu-Hsiang Tseng, Yatish Turakhia

DIPPER is a GPU-accelerated distance-based phylogenetic tool that achieves ultrafast and ultralarge phylogenetic reconstruction with improved speed, accuracy, and memory efficiency.

2 citations

experimental assayphylogenetics / evolution

𝕏 PostBluesky

BioinformaticsNature GeneticsPeer-reviewedJan 12, 2026

Compressive Pangenomics Using Mutation-Annotated Networks

Sumit Walia, Harsh Motwani, Yu-Hsiang Tseng…·Yatish Turakhia

This paper introduces PanMAN, a compressed pangenome data structure that captures evolutionary and mutational histories, achieving significant compression and enabling more efficient pangenomic analysis.

11 citationstop 1%

statistical modeldatabase / resource

𝕏 PostBluesky