Author

Carlo Croci

University of PaviaORCID 0009-0006-7411-335XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:database / resource· 1 Research Focus:ecology & biodiversity· 1 Assay:long-read sequencing· 1 Assay:metagenomics· 1

Frequent Co-Authors

Michele CastelliiD· 2 shared Alessandra CafisoiD· 1 shared Alessandro Allievi· 1 shared Azita Baharibabadi· 1 shared Davide SasseraiD· 1 shared Elisa FesceiD· 1 shared Giulia Iamundo· 1 shared Giulio PetroniiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersBioinformatics

Michele CastelliORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintOct 30, 2026

SYMBIO-SCAN, a full-length 16S rRNA gene-based workflow optimized for bacterial symbiont detection and discovery from long read sequencing

Carlo Croci, Giulia Iamundo, Azita Baharibabadi…·Michele Castelli

SYMBIO-SCAN identifies high-quality full-length 16S rRNA gene sequences from long reads to discover bacterial symbionts in beetles, revealing novel genera and species.

DOI 10.64898/2026.10.26.761872

long-read sequencingexperimental assay

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MicrobiologybioRxivPreprintApr 17, 2026

Environmental DNA reveals long-term persistence of a Midichloria-like bacterium in a rainbow trout aquaculture and links Ichthyopthirius multifiliis with the red mark syndrome

Vecchio D., Siviglia Y., Alessandro Allievi…·Michele Castelli

The paper uses environmental DNA to detect RMS-MLO and I. multifiliis in trout farms, finding RMS-MLO persists long-term without correlating with RMS outbreaks, while I. multifiliis increases during outbreaks.

DOI 10.64898/2026.04.16.718929

metagenomicsexperimental assay

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