Author

Natalie S Katzenmeyer

Cleveland ClinicORCID 0009-0007-1786-5253Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Approach:experimental assay· 1 Assay:metagenomics· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

Frequent Co-Authors

Bryan A. RaubenoltiD· 2 shared Daniel J BlankenbergiD· 2 shared Fabio CumboiD· 2 shared Jayadev JoshiiD· 2 shared Jan ClaeseniD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

5 top collaborators · 10 mutual co-author links

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2 shared papersMicrobiology

Bryan A. RaubenoltORCID

Mutual co-authors in cluster

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2 papers

Recent·Most cited

MicrobiologybioRxivPreprintOct 12, 2026

Mechanistic prediction of fecal microbiota transplant engraftment and Clostridioides difficile colonization resistance with μODE

Fabio Cumbo, Jayadev Joshi, Bryan A. Raubenolt…·Daniel J Blankenberg

This paper introduces muODE, a framework that simulates microbial community dynamics using metagenomics data to predict FMT outcomes and C. difficile resistance.

DOI 10.64898/2026.10.09.758137

metagenomicsstatistical model

𝕏 PostBluesky

BioinformaticsbioRxivPreprintOct 4, 2026

GalaxyMemMD: an end-to-end Galaxy toolset for reproducible membrane embedding, molecular dynamics simulation, and analysis of membrane proteins

Jayadev Joshi, Bryan A. Raubenolt, Natalie S Katzenmeyer…·Daniel J Blankenberg

GalaxyMemMD provides a reproducible, high-throughput pipeline for membrane protein simulation and analysis, integrating embedding, MD simulation, and downstream analysis.

DOI 10.64898/2026.09.28.755125

experimental assaysoftware / tool

𝕏 PostBluesky