Lisa Vader

PhyloNaP provides a database of phylogenetic trees for biosynthetic enzymes, enabling functional inference and community contributions.

geneML improves fungal gene prediction accuracy and recall using deep learning, outperforming existing tools and enabling faster, more comprehensive genome annotation.

This paper introduces plasmidEC and gplas2 to accurately predict and reconstruct antibiotic resistance plasmids in E. coli using short-read sequencing data, outperforming existing methods.