Author

Danielle Schoenecker

University of MinnesotaORCID 0009-0008-5633-7258Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:Arabidopsis· 2 Research Focus:cell type annotation· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:genetic perturbation / CRISPR· 1

Frequent Co-Authors

Ananda MenoniD· 2 shared Kathleen GreenhamiD· 2 shared Zachary MyersiD· 2 shared Adelaide HazeniD· 1 shared Alveena ZulfiqariD· 1 shared Angela M RiconoiD· 1 shared Ava Wise· 1 shared Chiemeka K. Nwakama· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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2 shared papersPlant Biology

Ananda MenonORCID

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2 papers

Recent·Most cited

Plant BiologybioRxivPreprintJul 27, 2026

Paralog diversification masks conserved diel regulatory programs during cold acclimation in Brassica rapa

Angela M Ricono, Zachary Myers, Danielle Schoenecker…·Kathleen Greenham

This study shows that cold acclimation in Brassica rapa involves diel retiming, paralog-specific regulation, and conserved regulatory programs masked by paralog diversification.

DOI 10.64898/2026.07.24.740384

Arabidopsisbulk RNA-seq

𝕏 PostBluesky

Plant BiologybioRxivPreprintJun 12, 2025

Tissue Context Shapes the Circadian Transcriptome of the Arabidopsis Leaf

Alveena Zulfiqar, Zachary Myers, Danielle Schoenecker…·Kathleen Greenham

This study uses snRNA-seq and spatial transcriptomics to show that circadian gene expression in Arabidopsis leaves is both cell-type-specific and spatially organized.

3 citations

ArabidopsissnRNA-seq

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