Author

Jindou Xie

Chinese Academy of SciencesORCID 0009-0009-1656-6600Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Organism:human· 1 Assay:protein structure· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

Guangshuo OuiD· 1 shared James L. ManleyiD· 1 shared Jian ZhangiD· 1 shared Ming Li· 1 shared Pedro Bak‐GordoniD· 1 shared Peiqi XingiD· 1 shared Wei Li· 1 shared Yongping ChaiiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperBioinformatics

Guangshuo OuORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintSep 17, 2026

Integrating structural and biological evidence to rerank ESMFold2 protein-protein interactions

Jindou Xie, Ming Li, Yongping Chai…·Zhengyang Guo

The paper develops a framework to rerank protein-protein interactions using structural and biological evidence, improving prediction accuracy over structural-only methods.

DOI 10.64898/2026.09.16.751194

protein structuredeep learning

𝕏 PostBluesky

Molecular BiologybioRxivPreprintFeb 17, 2025

SUGP1 loss is the sole driver of SF3B1 hotspot mutant missplicing in cancer

Peiqi Xing, Pedro Bak‐Gordon, Jindou Xie…·James L. Manley

The paper identifies SUGP1 loss as the sole driver of SF3B1 hotspot mutant missplicing in cancer, while AQR loss has an indirect effect.

DOI 10.1101/2025.02.17.638713

humanbulk RNA-seq

𝕏 PostBluesky