Shiyuan Wang

A sparse mixture-of-experts DNA model conditioned on hyperbolic taxonomy embeddings learns better microbial representations than its taxonomy-free twin and comes close to Evo2-7B in probing and fine-tuning at lower compute.

MurineCyto-Det provides a high-resolution, annotated murine BALF cytology dataset for cell segmentation and detection, highlighting challenges in automated analysis.

METAHICT improves metagenomic Hi-C analysis by integrating binning, reassembly, and downstream tools to recover high-quality MAGs and reduce contamination.

This study characterizes allele-specific regulatory variation in hybrid pigs using multi-omic data across tissues and developmental stages, identifying genes influenced by parent-of-origin and genotype effects.