Anant Maheshwari

The paper introduces HiRepEat, a method for efficiently discovering and clustering LTR-retrotransposon families across genomes, showing results on vertebrate and Drosophila genomes.

The paper uses enhancer scrambling to study a super-enhancer of the OTX2 gene, finding that a single DNase I hypersensitive site predominantly controls its expression.

ralphi uses deep reinforcement learning to improve haplotype assembly, achieving lower error rates than existing methods on standard benchmarks.

The paper identifies a common flanking variant linked to increased meiotic stability at the FGF14-SCA27B repeat locus.