eLifeGenetic & Genomic MedicinePeer-reviewed journal article
Genetic insights into ossification of the posterior longitudinal ligament of the spine
Yoshinao KoikeiD, Masahiko TakahataiD, Masahiro Nakajima, Nao OtomoiD, Hiroyuki SuetsuguiD, Xiaoxi LiuiD, Tsutomu EndoiD, Shiro ImagamaiD, Kazuyoshi KobayashiiD, Takashi KaitoiD, Satoshi KatoiD, Yoshiharu KawaguchiiD, Masahiro KanayamaiD, Hiroaki SakaiiD, Takashi TsujiiD, Takeshi Ken MiyamotoiD, Hiroyuki InoseiD, Toshitaka YoshiiiD, Masafumi KashiiiD, Hiroaki NakashimaiD, Kei AndoiD, Yuki TaniguchiiD, Kazuhiro TakeuchiiD, Shuji ItoiD, Kohei TomizukaiD, , Shiro IkegawaiD
Abstract
BackgroundOssification of the posterior longitudinal ligament of the spine (OPLL) is an intractable disease, leading to severe neurological deficits. Its etiology and pathogenesis are mostly unknown. The relationship between OPLL and comorbidities, especially type 2 diabetes (T2D) and body mass index (BMI), has been the focus of attention; however, no trait has been proven to have a causal relationship. MethodsTo clarify the etiology and pathogenesis of OPLL, we conducted a meta-analysis of genome-wide association studies (GAWSs) using 22,016 Japanese individuals. We classified OPLL into cervical, thoracic and the other types, and conducted GWAS sub-analyses. We conducted a gene- based association analysis and a transcriptome-wide Mendelian randomization approach to identify other potential causal genes. To investigate cell groups related to OPLL, we conducted cell type group enrichment analysis. To identify traits with a causal effect on OPLL, we evaluated the genetic correlation with 99 complex traits and then performed mendelian randomization (MR) analyses. Finally, we generated polygenic risk score (PRS) to investigate the genetic impact of the causal trait on OPLL subtypes. ResultsA GWAS meta-analysis identified 14 significant loci, including eight novel loci. GWAS sub-analyses identified subtype-specific signals. A Gene-based association analysis and a transcriptome-wide Mendelian randomization approach identified five and three potential causal genes, respectively. These loci/genes contained bone metabolism-related genes. Cell type group enrichment analysis observed significant enrichment of the polygenic signals in the active enhancers of the connective/bone cell group, especially H3K27ac in chondrogenic differentiation cells. Genetic correlations showed positive correlation with T2D and BMI and negative correlation with cerebral aneurysm and osteoporosis. MR analyses demonstrated a significant causal effect of increased BMI and high bone mineral density (BMD) on OPLL, but not of T2D, indicating that high BMI confounded the T2D correlation. A PRS for BMI demonstrated that the effect of BMI was particularly strong in thoracic OPLL. ConclusionWe identified multiple causative genes involved in bone metabolism that are candidates for future therapeutic targets. By MR analyses, we showed for the first time a causal relationship between the common metabolic conditions (high BMI and BMD) and OPLL. We successfully linked intervenable traits to OPLL.
- organism: human
- assay: GWAS summary statistics
- research focus: GWAS / association mapping
- research focus: fine-mapping
- approach: statistical model
- approach: Bayesian inference
- Citations
- 43
- FWCI
- 2.78
- Field percentile
- top 6%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Trans-ethnic polygenic analysis supports genetic overlaps of lumbar disc degeneration with height, body mass index, and bone mineral density
Xueya Zhou, Ching‐Lung Cheung, … Pak Chung Sham·Frontiers in GeneticsPeer-reviewed·Aug 3, 2018
- Using multivariable Mendelian randomization to estimate the causal effect of bone mineral density on osteoarthritis risk, independent of body mass index
April E. Hartley, Eleanor C. M. Sanderson, … Jonathan H. Tobias·International Journal of EpidemiologyPeer-reviewed·Nov 15, 2021
- Genetic analysis of obstructive sleep apnoea discovers a strong association with cardiometabolic health
Satu J. Strausz, Sanni Ruotsalainen, … Samuli Ripatti·European Respiratory JournalPeer-reviewed·Nov 26, 2020
- Identification of known and novel long non-coding RNAs potentially responsible for the effects of BMD GWAS loci
Abdullah Abood, Larry D. Mesner, … Charles R. Farber·Journal of Bone and Mineral ResearchPeer-reviewed·Dec 1, 2020
- Disentangling osteoarthritis-specific genetic effects from obesity to identify novel therapeutic targets
Chen‐Yang Su, Masashi Hasebe, … Guillaume Butler‐Laporte·medRxiv·Sep 23, 2025
- Investigating shared genetic architecture between obesity and multiple sclerosis
Ruijie Zeng, Rui Jiang, … Hao Hui Chen·medRxiv·Dec 7, 2022