Genome-wide identification and analysis of analysis of BURP genes in Triticum aestivum
Abstract
Plant-specific BURP genes are involved in most aspects of plant development and in diverse stress responses. However, there has been no comprehensive and systematic research on the wheat (Triticum aestivum L.) BURP gene family. We comprehensively identified 54 BURP genes in wheat and 12, 23, and 32 BURP genes, respectively, in its three progenitor species, Triticum urartu, Aegilops tauschii, and Triticum dicoccoides. By phylogenetic analysis, we classified the wheat BURP genes into five subfamilies: BURP VI, BURP VII, RD22-like, PG1{beta}-like, and the newly defined BURP VIII. BURP genes were distributed unevenly on 20 chromosomes, and 33 (61%) were anchored in the distal chromosome segments. Analysis of gene duplication events showed that segmental duplication was the main contributor to the expansion of this gene family in wheat. Assessment of tissue-specific and stress-induced expression indicated that most BURP members are heavily involved in plant development and responses to various stress conditions. RNA-seq data revealed ten TaBURP genes expressed specifically in spikes.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 1
- Organism
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Genome wide characterization and expression analysis of CrRLK1L gene family in wheat unravels their roles in development and stress-specific responses
N. D. Gawande, S. Sankaranarayanan·bioRxiv·May 24, 2023
- Molecular characterization revealed the role of thaumatin-like proteins in stress response in bread wheat
Alok Sharma, Himanshu Sharma, … Santosh Kumar Upadhyay·Frontiers in Plant SciencePeer-reviewed·Jan 10, 2022
- Genome sequences of the five Sitopsis species of Aegilops and the origin of polyploid wheat B-subgenome
L. Li, Z. Zhang, … B. Liu·Molecular PlantPeer-reviewed·Mar 1, 2022
- All families of transposable elements were active in the recent wheat genome evolution and polyploidy had no impact on their activity
Nathan Papon, Pauline Lasserre‐Zuber, … Frédéric Choulet·The Plant GenomePeer-reviewed·May 26, 2023
- MADS-box genes galore in wheat genome: phylogenomics, evolution and stress associated functions
Qasim Saleem Raza, Awais Riaz, … Hikmet Budak·bioRxiv·Oct 23, 2020
- Origin and evolution of the bread wheat D genome
Emile Cavalet-Giorsa, Andrea González-Muñoz, … Simon G. Krattinger·NaturePeer-reviewed·Aug 14, 2024