bioRxivSystems BiologyPreprint
Continuous Rate Modelling of bacterial stochastic size dynamics
Abstract
Bacterial division is an inherently stochastic process. However, theoretical tools to simulate and study the stochastic transient dynamics of cell-size are scarce. Here, we present a general theoretical approach based on the Chapman-Kolmogorov formalism to describe these stochastic dynamics including continuous growth and division events as jump processes. Using this approach, we analyze the effect of different sources of noise on the dynamics of the size distribution. Oscillations in the distribution central moments were found as consequence of the discrete translation invariance of the system with period of one doubling time, these oscillations are found in both the central moments of the size distribution and the auto-correlation function and do not disappear including stochasticity on division times or size heterogeneity on the population but only after include noise in either growth rate or septum position.
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- The role of division stochasticity on the robustness of bacterial size dynamics
César Nieto, Juan Carlos Arias-Castro, … Juan Manuel Pedraza·bioRxiv·Jul 27, 2022
- Cell size statistics in cell lineages and population snapshots with different growth regimes and division strategies.
Niccolò Totis, César Nieto, … Steffen Waldherr·bioRxiv·May 15, 2020
- Noise suppression in cell-size control
Abhyudai Singh·bioRxiv·Jan 5, 2017
- Hybrid systems approach to modeling stochastic dynamics of cell size
Cesar Augusto Vargas-Garcia, Abhyudai Singh·bioRxiv·Mar 16, 2016
- Analysis of noise mechanisms in cell size control
Saurabh Modi, Cesar A. Vargas-García, … Abhyudai Singh·Biophysical JournalPeer-reviewed·Jun 1, 2017
- Noise signature in added size suggests bacteria target a commitment size to enable division
César Nieto, Juan Carlos Arias-Castro, … Juan Manuel Pedraza·bioRxiv·Jul 15, 2020