Comparison between O and OH intermediates of cytochrome c oxidase studied by FTIR spectroscopy.
Abstract
Cytochrome c oxidase is terminal enzyme in the respiratory chain of mitochondria and many aerobic bacteria. It catalyzes reduction of oxygen to water. During its catalysis, CcO proceeds through several quite stable intermediates (R, A, PR/M, O/OH, E/EH). This work is concentrated on the elucidation of the differences between structures of oxidized intermediates O and OH in different CcO variants and at different pH values. Oxidized intermediates of wild type and mutated CcO from Paracoccus denitrificans were studied by means of static and time-resolved Fourier-transform infrared spectroscopy in acidic and alkaline conditions in the infrared region 1800-1000 cm-1. No reasonable differences were found between all variants in these conditions, and in this spectral region. This finding means that the binuclear center of oxygen reduction keeps a very similar structure and holds the same ligands in the studied conditions. The further investigation in search of differences should be performed in the 4000-2000 cm-1 IR region where water ligands absorb.\n\nAbbreviations
02 /Specification & Classification
Click any tag to browse matching papers- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Structural basis for functional properties of cytochrome c oxidase
I. Ishigami, R. G. Sierra, … D. L. Rousseau·bioRxiv·Mar 20, 2023
- Detection of a geminate photoproduct of bovine cytochrome c oxidase by time-resolved serial femtosecond crystallography
S.-R. Yeh, I. Ishigami, … C. Conrad·bioRxiv·May 8, 2023
- Anaerobic time-resolved serial crystallography captures CO dissociation and rebinding in oxygen-sensitive -hydrogenase
Ivan Voloshyn, Robin Stipp, … Moritz Senger·bioRxiv·Jul 23, 2026
- Use of Substrate Analogues and X-ray spectroscopy Reveals an all Ferrous C-Cluster in CO Dehydrogenase
Macon J. Abernathy, Kareem Aboulhosn, … Ritimukta Sarangi·bioRxiv·Jan 22, 2026
- Structural basis for loss of covalent flavinylation in the H158Y mutant of pyranose oxidase
Yuki Yashima, Clemens Peterbauer, … Kiyohiko Igarashi·bioRxiv·Feb 17, 2026
- The Structure of Oxalate Decarboxylase at its Active pH
M. J. Burg, J. L. Goodsell, … A. Angerhofer·bioRxiv·Sep 25, 2018