Identification and validation of aging-related genes in heart failure based on multiple machine learning algorithms
Yiding YuiD, Lin WangiD, Wangjun Hou, Yitao XueiD, Xiujuan LiuiD, Yan LiiD
Abstract
BackgroundIn the face of continued growth in the elderly population, the need to understand and combat age-related cardiac decline becomes even more urgent, requiring us to uncover new pathological and cardioprotective pathways. MethodsWe obtained the aging-related genes of heart failure through WGCNA and CellAge database. We elucidated the biological functions and signaling pathways involved in heart failure and aging through GO and KEGG enrichment analysis. We used three machine learning algorithms: LASSO, RF and SVM-RFE to further screen the aging-related genes of heart failure, and fitted and verified them through a variety of machine learning algorithms. Finally, we searched for drugs to treat age-related heart failure through the DSigDB database. ResultsWe obtained 57 up-regulated and 195 down-regulated aging-related genes in heart failure through WGCNA and CellAge databases. GO and KEGG enrichment analysis showed that aging-related genes are mainly involved in mechanisms such as Cellular senescence and Cell cycle. We further screened aging-related genes through machine learning and obtained 14 key genes. We verified the results on the test set and 2 external validation sets using 15 machine learning algorithm models and 207 combinations, and the highest accuracy was 0.911. Through screening of the DSigDB database, we believe that rimonabant and lovastatin have the potential to delay aging and protect the heart. ConclusionsWe identified aging signature genes and potential therapeutic drugs for heart failure through bioinformatics and multiple machine learning algorithms, providing new ideas for studying the mechanism and treatment of age-related cardiac decline.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 11
- FWCI
- 1.36
- Field percentile
- top 21%
- Organism
- Assay
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Identification of senescence-related hub genes and potential therapeutic agents for chronic heart failure
Hao Xie, Zuyuan You, … Qi Yang·bioRxiv·Jun 21, 2025
- Transcriptome of left ventricle and sinoatrial node in young and old C57 mice
Jia-Hua Qu, Kirill V. Tarasov, … Edward G. Lakatta·Fortune Journal of Health SciencesPeer-reviewed·Jan 1, 2023
- Identification of biomarkers, pathways and potential therapeutic targets for heart failure using bioinformatics analysis
Basavaraj Mallikarjunayya Vastrad, Chanabasayya Mallikarjunayya Vastrad·bioRxiv·Aug 5, 2021
- Identification of candidate biomarkers and therapeutic agents for heart failure by bioinformatics analysis
Vijayakrishna Kolur, Basavaraj Mallikarjunayya Vastrad, … Anandkumar Tengli·BMC Cardiovascular DisordersPeer-reviewed·Jul 4, 2021
- Genome-wide transcript and protein analysis reveals distinct features of aging in the mouse heart
Isabela Gerdes Gyuricza, Joel M. Chick, … Gary A. Churchill·Genome ResearchPeer-reviewed·Mar 11, 2022
- Identification of immune-related genes for the diagnosis of ischaemic heart failure based on bioinformatics and three machine learning models