bioRxivNeurosciencePreprint
Dissecting brain grey and white matter microstructure: a novel clinical diffusion MRI protocol
Simona SchiaviiD, Marco PalomboiD, Domenico ZacàiD, Francesco TazzaiD, Caterina LapucciiD, Lucio CastellaniD, Mauro CostagliiD, Matilde IngleseiD
Abstract
Soma and Neurite Density Image (SANDI) is an advanced diffusion magnetic resonance imaging (dMRI) signal model devised to probe in vivo microstructural information from both grey and white matter. However, this model requires multi-shell acquisitions that include b-values that are at least 6 times higher than those used in clinical practice. Here we present a 10-minute acquisition protocol that enables to acquire the necessary images for SANDI modelling on a clinical 3T scanner. We demonstrate the feasibility and assess the repeatability and reproducibility of our approach by computing microstructural metrics of SANDI and other state-of-the-art models on five healthy subjects and we present its potential clinical impact on five subjects affected by multiple sclerosis with relapsing-remitting course. Our results suggest that SANDI is a repeatable, reproducible, feasible, and practical method to characterize both white and grey matter tissues in both the healthy brain and in neurological diseases.
- Citations
- 4
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Soma and Neurite Density MRI (SANDI) of the in-vivo mouse brain
Andrada Ianuș, Joana Carvalho, … Noam Shemesh·bioRxiv·Aug 11, 2021
- Characterization of neurite and soma organization in the brain and spinal cord with diffusion MRI
Kurt G. Schilling, Marco Palombo, … Seth A. Smith·Imaging NeurosciencePeer-reviewed·Jan 1, 2025
- Repeatability of soma and neurite metrics incortical and subcortical grey matter
Sila Genc, Maxime Chamberland, … Derek Kenton Jones·Mathematics and visualizationPeer-reviewed·Jan 1, 2021
- Ex vivo massively multidimensional diffusion-relaxation correlation MRI: scan-rescan reproducibility and caveats
Pak Or, Maxime Yon, … Dan Benjamini·bioRxiv·Mar 17, 2025
- The variability of multidimensional diffusion-relaxation MRI estimates in the human brain
Eppu Manninen, Shunxing Bao, … Dan Benjamini·Imaging NeurosciencePeer-reviewed·Jan 1, 2024
- In vivo disentanglement of diffusion frequency-dependence, tensor shape, and relaxation using multidimensional MRI
Jessica T. E. Johnson, Mustafa Okan Irfanoglu, … Dan Benjamini·Human Brain MappingPeer-reviewed·May 1, 2024