A genetic hazard score to personalize prostate cancer screening, applied to population data
Minh‐Phuong Huynh‐LeiD, Chun Chieh FaniD, Roshan A. KarunamuniiD, Eleanor I. WalshiD, Emma L. TurneriD, J. Athene LaneiD, Richard Michael MartiniD, David Edgar NealiD, Jenny DonovaniD, Freddie Charles HamdyiD, John Kellogg ParsonsiD, Rosalind A. EelesiD, Douglas F. EastoniD, Zsofia Kote‐JaraiiD, Ali Amin Al OlamaiD, Sara Benlloch Garcia, Kenneth Ross MuiriD, Henrik GrönbergiD, Fredrik E. WiklundiD, Markus AlyiD, Johanna SchleutkeriD, Csilla SipekyiD, Teuvo L.J. TammelaiD, Børge Grønne NordestgaardiD, Timothy J. KeyiD, , Tyler M. SeibertiD
Abstract
BackgroundGenetic risk stratification may inform decisions of whether--and when--a man should undergo prostate cancer (PCa) screening. We previously validated a polygenic hazard score (PHS), a weighted sum of 54 single-nucleotide polymorphism genotypes, for accurate prediction of age of onset of aggressive PCa and improved screening performance. We now assess the potential impact of PHS-informed screening.\n\nMethodsUnited Kingdom population data were fit to a continuous model of age-specific PCa incidence. Using hazard ratios estimated from ProtecT trial data, age-specific incidence rates were calculated for percentiles of genetic risk. Incidence of higher-grade PCa (Gleason[≥]7) was estimated from age-specific data from the linked CAP trial. PHS and incidence data were combined to give a risk-equivalent age, when a man with a given PHS percentile will have risk of higher-grade PCa equivalent to that of a typical man at age 50 (50-years standard). Positive predictive value (PPV) of PSA testing was calculated using PHS-adjusted (PCa-risk-equivalent age) groups identified from ProtecT.\n\nResultsExpected age of onset of higher-grade PCa is modulated by 19 years between the 1st and 99th PHS percentiles. A man with PHS in the 99th percentile reaches 50-years-standard risk at age 41; conversely, a man in the 1st percentile reaches this risk at age 60. PPV of PSA was higher for men with higher PHS-adjusted age.\n\nConclusionsPHS informs PCa screening strategies with individualized estimates of risk-equivalent age for higher-grade PCa. Screening initiation could be adjusted according to a mans genetic hazard score, improving PPV of PSA screening.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 0
- Organism
- Assay
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- A genetic risk score to guide age-specific, personalized prostate cancer screening
Tyler M. Seibert, Chun Chieh Fan, … Anders Martin Dale·bioRxiv·Nov 25, 2016
- Polygenic hazard score is associated with prostate cancer in multi-ethnic populations
Minh‐Phuong Huynh‐Le, Chun Chieh Fan, … Tyler M. Seibert·Nature CommunicationsPeer-reviewed·Feb 23, 2021
- Prostate cancer risk stratification improved across multiple ancestries with new polygenic hazard score
Minh‐Phuong Huynh‐Le, Roshan A. Karunamuni, … Canary PASS Investigators·medRxiv·Aug 14, 2021
- Precision Prostate Cancer Screening with a Polygenic Risk Score
Tõnis Tasa, Mikk Puustusmaa, … Peeter Padrik·medRxiv·Aug 23, 2020
- Genetically Adjusted PSA Levels for Prostate Cancer Screening
Linda Kachuri, Thomas J. Hoffmann, … John S. Witte·Nature MedicinePeer-reviewed·Jun 1, 2023
- Improved prostate cancer prediction by combining Prostate-Specific Antigen (PSA) test results with Genetic Risk Scores (GRS/PRS)
Jingzhan Lu, Ge Chen, … Harry Green·medRxiv·May 18, 2026