A highly active phosphate-insensitive phosphatase is widely distributed in nature
I. D. E. A. Lidbury, D. Scanlan, A. R. J. Murphy, J. Christie-Oleza, M. d. M. Aguilo-Ferretjans, A. Hitchcock, T. Daniell
Abstract
The regeneration of bioavailable phosphate from immobilised organophosphorus represents a key process in the global phosphorus cycle and is facilitated by enzymes known as phosphatases. Most bacteria possess at least one of three major phosphatases, known as PhoA, PhoX and PhoD, whose activity is optimal under alkaline conditions. The production and activity of these three phosphatase families is negatively regulated by phosphate availability and thus these enzymes play a major role in scavenging phosphorus only during times of phosphate scarcity. Here, we reveal a previously overlooked phosphate-insensitive phosphatase, PafA, prevalent in Bacteroidetes, which is highly abundant in nature and represents a major route for the remineralisation of phosphate in the environment. Using Flavobacterium johnsoniae as the model, we reveal PafA is highly active towards phosphomonoesters. Unlike other major phosphatases, PafA is fully functional in the presence of its metabolic product, phosphate, and is essential for growth on phosphorylated carbohydrates as a sole carbon source. PafA, which is constitutively produced under all growth conditions tested, rapidly remineralises phosphomonoesters producing significant quantities of bioavailable phosphate that can cross feed into neighbouring cells. pafA is both abundant and highly expressed in the global ocean and abundant in plant rhizospheres, highlighting a new and important enzyme in the global phosphorus cycle with applied implications for agriculture as well as biogeochemical cycling. We speculate PafA expands the metabolic niche of Bacteroidetes by enabling utilisation of abundant organophosphorus substrates in the presence of excess phosphate, when other microbes are rendered incapable. Significance statementPhosphorus is an essential element for all life on Earth. Global primary production, and thus the ability for oceans and soils to drawdown atmospheric carbon dioxide, is in part controlled by the availability of inorganic phosphate. Likewise, global food production is also reliant on adequate supplies of phosphorus to both plants and animals. A major fraction of the total phosphorus pool exists as organic phosphorus, which requires mineralisation to phosphate prior to incorporation into cellular biomolecules. This important process is performed by enzymes known as phosphatases. Here, we reveal that the unique bacterial phosphatase, PafA, is a key player in the global phosphorus cycle and presents a major route for the regeneration of bioavailable phosphate required for both primary and secondary production.
02 /Specification & Classification
Click any tag to browse matching papersReproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Widespread promiscuous alkaline phosphatases underscore early microbial phosphite utilization
Morito Sakuma, Naoki Konno, … Nobuhiko Tokuriki·bioRxiv·Apr 29, 2025
- Alkaline phosphatase activity supports heterotrophic carbon acquisition in a coastal time series site and a representative marine bacterium
Eesha Sachdev, Jamee C. Adams, … Julia M. Diaz·bioRxiv·Mar 25, 2026
- Microbial remineralization processes during post-spring-bloom excess phosphate in the northern Baltic Sea
Mari Vanharanta, Mariano Santoro, … Kristian Spilling·FEMS Microbiology EcologyPeer-reviewed·Jul 12, 2024
- One enzyme many faces: alkaline phosphatase-based phosphorus-nutrient strategies and the regulatory cascade revealed by CRISPR/Cas9 gene knockout
- Novel mechanisms for phosphate acquisition in abundant rhizosphere-dwelling Bacteroidetes
I. D. E. A. Lidbury, D. Scanlan, … E. Wellington·bioRxiv·Jul 31, 2019
- Biogenic phosphonate utilization by globally distributed diatom Thalassiosira