BMC BioinformaticsBioinformaticsPeer-reviewed journal article
Differential Expression Analysis with InMoose, the Integrated Multi-Omic Open-Source Environment in Python
Maximilien ColangeiD, Guillaume Appé, Léa MeunieriD, Solène WeilliD, Akpéli V. NordoriD, Abdelkader BehdennaiD
Abstract
We present the differential expression features of InMoose, a Python implementation of R tools limma, edgeR, and DESeq2. We experimentally show that InMoose stands as a drop-in replacement for those tools, with nearly identical results. This ensures reproducibility when interfacing both languages in bioinformatic pipelines. InMoose is an open source software released under the GPL3 license, available at www.github.com/epigenelabs/inmoose and https://inmoose.readthedocs.io.
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- top 13%
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