Guillaume Appé

This paper identifies CMS4-specific antigen targets in colorectal cancer using a large harmonized multi-omic knowledge base and prioritization pipeline, revealing 236 candidates with therapeutic potential.

InMoose provides a Python implementation of differential expression tools with results similar to R-based tools, ensuring reproducibility across languages.

The paper introduces InMoose, an open-source Python environment for bulk transcriptomic analysis, offering tools for data simulation, batch correction, and differential analysis.

pyComBat provides a Python implementation of ComBat and ComBat-Seq for batch effect correction in microarray and RNA-Seq data, offering similar performance with improved speed and open-source accessibility.