Predicting Antibody Developability from Sequence using Machine Learning
Xingyao CheniD, Thomas DoughertyiD, Chan Hong, Rachel S. Schibler, Yi Cong Zhao, Reza SadeghiiD, Naim MatasciiD, Yi-Chieh WuiD, Ian Kerman
Abstract
Antibodies are prominent therapeutic agents but costly to develop. Existing approaches to predict developability depend on structure, which requires expensive laboratory or computational work to obtain. To address this issue, we present a machine learning pipeline to predict developability from sequence alone using physicochemical and learned embedding features. Our approach achieves high sensitivity and specificity on a dataset of 2400 antibodies. These results suggest that sequence is predictive of developability, enabling more efficient development of antibodies.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 26
- Assay
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- PROPERMAB: an integrative framework for in silico prediction of antibody developability using machine learning
Bian Li, Shukun Luo, … Gurinder S. Atwal·mAbsPeer-reviewed·Mar 5, 2025
- A high-throughput platform for biophysical antibody developability assessment to enable AI/ML model training
Ammar Arsiwala, Rebecca Bhatt, … David W. Borhani·mAbsPeer-reviewed·Dec 2, 2025
- An interpretable open platform for sequence-based antibody developability prediction
Hoan N. Nguyen, Deepash Kothiwal, … Andre A. R. Teixeira·bioRxiv·Sep 24, 2026
- Prediction of Antibody Non-Specificity using Protein Language Models and Biophysical Parameters
Laila Ismail Sakhnini, Ludovica Beltrame, … Daniele Granata·mAbsPeer-reviewed·May 27, 2026
- Accelerating Antibody Development: Sequence and Structure-Based Models for Predicting Developability Properties through Size Exclusion Chromatography
A N M Nafiz Abeer, Mehdi Boroumand, … Maryam Pouryahya·bioRxiv·Feb 2, 2025
- Predicting the Purity of Multispecific Antibodies From Sequence Using Machine Learning: Methods and Applications
Aviva Mazurek, Athena Davis, … Srinath Kasturirangan·bioRxiv·Dec 5, 2023