Sign in
Evolutionary BiologybioRxiv

Controlling the speed and trajectory of evolution with counterdiabatic driving

S. Iram, E. Dolson, J. Chiel, J. Pelesko, N. Krishnan, O. Güngör, B. Kuznets-Speck, S. Deffner, E. Ilker, J. G. Scott, M. Hinczewski

Abstract

The pace and unpredictability of evolution are critically relevant in a variety of modern challenges: combating drug resistance in pathogens and cancer, understanding how species respond to environmental perturbations like climate change, and developing artificial selection approaches for agriculture. Great progress has been made in quantitative modeling of evolution using fitness landscapes, allowing a degree of prediction for future evolutionary histories. Yet fine-grained control of the speed and the distributions of these trajectories remains elusive. We propose an approach to achieve this using ideas originally developed in a completely different context - counterdiabatic driving to control the behavior of quantum states for applications like quantum computing and manipulating ultra-cold atoms. Implementing these ideas for the first time in a biological context, we show how a set of external control parameters (i.e. varying drug concentrations / types, temperature, nutrients) can guide the probability distribution of genotypes in a population along a specified path and time interval. This level of control, allowing empirical optimization of evolutionary speed and trajectories, has myriad potential applications, from enhancing adaptive therapies for diseases, to the development of thermotolerant crops in preparation for climate change, to accelerating bioengineering methods built on evolutionary models, like directed evolution of biomolecules.

PDFDOI

02 /Specification & Classification

Click any tag to browse matching papers

Reproducibility ledger

Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.

Sign in to file a reproducibility report.

Similarity Map
SelectedSame fieldCross-field
THISCorrao '24Nourmohamma '19Park '26Park '25Fraebel '16Das '21
65% semantic matchEvolutionary Biology
Marco Corrao, Gabriel Abrahams, Harrison Steel·bioRxiv·Apr 8, 2024· 3 citations