Advanced Intelligent DiscoverySystems BiologyPeer-reviewed journal article
DeepMapper: Attention-Based AutoEncoder for System Identification in Wound Healing and Stage Prediction
Fan LuiD, Ksenia ZlobinaiD, Michael Briden, Oscar Avalos, Héctor Carrión, Sebastian Casadiegos Osorio, Hsin‐ya YangiD, Alexandra Nava, Michelle Dawn BagoodiD, Marco RolandiiD, Roslyn Rivkah Isseroff, Marcella M. GomeziD
Abstract
Advancements in bioelectronic sensors and actuators have paved the way for real-time monitoring and control of wound healing progression. Real-time monitoring allows for precise adjustment in treatment strategies that align with an individuals unique biological response. However, due to the complexities of human-drug interactions and a lack of predictive models it is challenging to determine just how one should adjust drug dosage to achieve the desired biological response. This work proposes an adaptive closed-loop control framework that integrates deep learning, optimal control, and reinforcement learning to update treatment strategies in real-time with the goal of accelerating wound closure. The proposed approach eliminates the need for mathematical modeling of complex nonlinear wound healing dynamics. We demonstrate the convergence of the controller via an in silico experimental setup, where the proposed approach successfully accelerates the wound healing process by 17.71%. Finally, we share the experimental setup and results of an in vivo implementation to highlight the translational potential of our work. Our data-driven model estimates a 40% acceleration in wound closure.
- organism: human
- research focus: drug response / drug discovery
- approach: deep learning
- approach: optimal transport
- approach: machine learning (classical)
- Citations
- 6
- FWCI
- 2.77
- Field percentile
- top 16%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Accelerating Wound Healing Through Deep Reinforcement Learning: A Data-Driven Approach to Optimal Treatment
Fan Lu, Ksenia Zlobina, … Marcella Gomez·BioengineeringPeer-reviewed·Jul 11, 2025
- Wireless closed-loop smart bandage for chronic wound management and accelerated tissue regeneration
Y. Jiang, A. Trotsyuk, … Z. Bao·bioRxiv·Jan 16, 2022
- Development of a wireless bioelectronic actuator for wound healing in a porcine model
Prabhat Baniya, Maryam Tebyani, … Mircea Teodorescu·Scientific ReportsPeer-reviewed·Nov 7, 2025
- Bacterial Controller Aided Wound Healing: A Case Study in Dynamical Population Controller Design
Leopold N. Green, Chelsea Y. Hu, … Richard M. Murray·bioRxiv·Jun 15, 2020
- Self-powered electronics-free Wearable Disposable Electrotherapy (WDE) platform for accelerated wound healing
Mojtaba Belali Koochesfahani, Kyle Donnery, … Marom Bikson·bioRxiv·Jul 23, 2026
- Remote-Controlled Wireless Bioelectronics for Fluoxetine Therapy to Promote Wound Healing in a Porcine Model
Houpu Li, Narges Asefifeyzabadi, … Marco Rolandi·Advanced Materials TechnologiesPeer-reviewed·May 19, 2025